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Short description:
Please summarise the application in a few sentences. Avoid links here. Estimate ecological diversity with both parametric and non-parametric estimators.
Software version:
Biological application domain(s) (Phylogenetics, Genomics, ...):
Population genetics, Metagenomics,
Principal bioinformatics method(s) (Assembly, Mapping, ...):
Technology (Sanger, Illumina, 454, SOLiD, Ion Torrent, ...):
Interface (Command line, Web UI, Desktop GUI, SOAP WS, HTTP WS, API, QL):
Resource type (Command-line tool, Web application, Desktop application, Script, Suite, Workbench, Database portal, Workflow, Plug-in, Library, Web API, Web service, SPARQL endpoint):
Cornell University
== Description == <!-- Describe the application in the space below --> ''CatchAll'' is a fast, easy-to-use, platform independent software package which applies optimized numerical searching to compute maximum likelihood estimates for finite-mixture models; linear regression-based models with non-diagonal weight matrices; as well as all existing simple nonparametric methods; while accounting for outlier detection/deletion and other data-analytic considerations. Given sample “frequency count” data, CatchAll computes 12 different diversity estimates and compares the results via a model-selection algorithm, providing the user with a best overall choice, along with close competitors. It is accompanied by an Excel-based graphical display spreadsheet program. <!-- -->
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