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Short description:
Please summarise the application in a few sentences. Avoid links here. de novo genome assembly is now a challenge because of the overwhelming amount of data produced by sequencers. Ray assembles reads obtained with new sequencing technologies (Illumina, 454, SOLiD) using MPI 2.2 -- a message passing inferface standard.
Software version:
Biological application domain(s) (Phylogenetics, Genomics, ...):
Sequence assembly (de novo assembly),
Principal bioinformatics method(s) (Assembly, Mapping, ...):
Sequence assembly,
Technology (Sanger, Illumina, 454, SOLiD, Ion Torrent, ...):
Illumina, 454
Interface (Command line, Web UI, Desktop GUI, SOAP WS, HTTP WS, API, QL):
Resource type (Command-line tool, Web application, Desktop application, Script, Suite, Workbench, Database portal, Workflow, Plug-in, Library, Web API, Web service, SPARQL endpoint):
Université Laval, Québec, Canada
Parallel de novo genome assemblies of next-gen sequencing data
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