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Short description:
Please summarise the application in a few sentences. Avoid links here. SOAP (Short Oligonucleotide Alignment Program) is a program for efficient gapped and ungapped alignment of short oligonucleotides onto reference sequences. SOAP2 is an updated program based on Burrows-Wheeler Transform.
Software version:
Biological application domain(s) (Phylogenetics, Genomics, ...):
SNP detection,
Principal bioinformatics method(s) (Assembly, Mapping, ...):
Sequence alignment, Read mapping, Genome indexing (Burrows-Wheeler),
Technology (Sanger, Illumina, 454, SOLiD, Ion Torrent, ...):
Interface (Command line, Web UI, Desktop GUI, SOAP WS, HTTP WS, API, QL):
Resource type (Command-line tool, Web application, Desktop application, Script, Suite, Workbench, Database portal, Workflow, Plug-in, Library, Web API, Web service, SPARQL endpoint):
Beijing Genomics Institute
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