Difference between revisions of "PyroBayes"

From SEQwiki
Jump to: navigation, search
m
m (Text replace - "SNP discovery" to "SNP detection")
 
(4 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
{{Bioinformatics application
 
{{Bioinformatics application
|sw summary=PyroBayes is a novel base caller for pyrosequences from the 454 Life Sciences sequencing machines. It was designed to assign more accurate base quality estimates to the 454 pyrosequences. Developers at Boston College.
+
|sw summary=PyroBayes is a novel base caller for pyrosequences from the 454 Life Sciences sequencing machines.
|bio domain=SNP discovery,  
+
|bio domain=SNP detection,
|bio method=Basecaller,  
+
|bio method=Base-calling,
 
|bio tech=454
 
|bio tech=454
 +
|created by=Quinlan AR
 +
|created at=The MarthLab
 +
|maintained=No
 +
|input format=SFF
 +
|output format=FASTA, FASTQ
 
}}
 
}}
 
+
PyroBayes was designed to assign more accurate base quality estimates to the 454.
Category: SNP/Indel Discovery
 
 
{{Links}}
 
{{Links}}
 
{{References}}
 
{{References}}
 +
{{Link box}}

Latest revision as of 15:43, 19 December 2015

Application data

Created by Quinlan AR
Biological application domain(s) SNP detection
Principal bioinformatics method(s) Base-calling
Technology 454
Created at The MarthLab
Maintained? No
Input format(s) SFF
Output format(s) FASTA, FASTQ

Summary: PyroBayes is a novel base caller for pyrosequences from the 454 Life Sciences sequencing machines.

"Error: no local variable "counter" was set." is not a number.

PyroBayes was designed to assign more accurate base quality estimates to the 454.

Links


References

  1. . 2008. Nature Methods


To add a reference for PyroBayes, enter the PubMed ID in the field below and click 'Add'.

 


Search for "PyroBayes" in the SEQanswers forum / BioStar or:

Web Search Wiki Sites Scientific