Difference between revisions of "DNAzip"
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=A series of techniques that in combination reduces a single genome to a size small enough to be sent as an email attachment. | |sw summary=A series of techniques that in combination reduces a single genome to a size small enough to be sent as an email attachment. | ||
| − | |bio method= | + | |bio method=File reformatting |
|created at=University of California Irvine | |created at=University of California Irvine | ||
|language=C++ | |language=C++ | ||
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A genome is compressed using a reference genome and a SNP database. | A genome is compressed using a reference genome and a SNP database. | ||
| − | The current code is more | + | The current code is more a proof of concept form and contains specific hard coded locations for the reference genome (human), SNPs and the genome to be compressed. |
Latest revision as of 21:46, 19 December 2015
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Application data |
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| Principal bioinformatics method(s) | File reformatting |
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| Created at | University of California Irvine |
| Maintained? | Maybe |
| Programming language(s) | C++ |
| Software libraries | bit file library |
Summary: A series of techniques that in combination reduces a single genome to a size small enough to be sent as an email attachment.
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Description
A genome is compressed using a reference genome and a SNP database.
The current code is more a proof of concept form and contains specific hard coded locations for the reference genome (human), SNPs and the genome to be compressed.
Links
References
To add a reference for DNAzip, enter the PubMed ID in the field below and click 'Add'.
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