Difference between revisions of "BWA"
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{{Bioinformatics application | {{Bioinformatics application | ||
| − | |sw summary=Fast, accurate, memory efficient aligner for short and long sequencing reads | + | |sw summary=Fast, accurate, memory-efficient aligner for short and long sequencing reads |
| − | |bio domain=Read alignment | + | |bio domain=Read alignment, Mapping |
|bio method=FM-Index | |bio method=FM-Index | ||
|bio tech=Sanger, Solexa/Illumina, 454, ABI SOLiD | |bio tech=Sanger, Solexa/Illumina, 454, ABI SOLiD | ||
Revision as of 11:41, 9 June 2010
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Application data |
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| Created by | Heng Li and Richard Durbin |
|---|---|
| Biological application domain(s) | Read alignment, Mapping |
| Principal bioinformatics method(s) | FM-Index |
| Technology | Sanger, Solexa/Illumina, 454, ABI SOLiD |
| Created at | Sanger Institute |
| Maintained? | Yes |
| Input format(s) | compressed/uncompressed fastq/fasta |
| Output format(s) | SAM |
| Software features | Gapped alignment, paired-end mapping |
| Programming language(s) | C |
| Licence | GPLv3, MIT |
| Operating system(s) | Unix |
Summary: Fast, accurate, memory-efficient aligner for short and long sequencing reads
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