|sw summary=Mapsembler explores is a targeted assembly software. It takes as input a set of NGS raw reads, trying to reconstruct an and a set of input sequence fragment sequences (the starterstarters). In case of successIt first determines if each starter is read-coherent, we say that e.g. whether reads confirm the presence of each starter is “read coherent”in the original sequence. In this caseThen for each read-coherent starter, Mapsembler outputs flanking neighbors its sequence neighborhood as a linear sequence or as a graph, depending on the user’s choicesuser choice.

Mapsembler explores is a targeted micro-assembly software. It takes as input a set of NGS raw reads, trying to reconstruct an and a set of input sequence fragment sequences (the starterstarters). In case of successIt first determines if each starter is read-coherent, we say that e.g. whether reads confirm the presence of each starter is “read coherent”in the original sequence. In this caseThen for each read-coherent starter, Mapsembler outputs flanking neighbors its sequence neighborhood as a linear sequence or as a graph, depending on the user’s choicesuser choice. Mapsembler may be used for (not limited to):