{{Bioinformatics application

|sw summary=Cortex is an efficient and low-memory software framework for analysis of genomes using sequence data. Cortex allows de novo assembly of variants without having to do a consensus assembly first. Also allows comparison of genomes without using consensus, and alignment of sequence data to a de Bruijn graph

|created by=Mario Caccamo, Zamin Iqbal

|created at=University of Oxford, TGAC, EBI

|maintained=Yes

|input format=FASTQ, FASTA,

|language=C

|licence=GPLv3