Difference between revisions of "Cutadapt"
| Line 2: | Line 2: | ||
|sw summary=remove adapter sequences from high-throughput sequencing data using alignment | |sw summary=remove adapter sequences from high-throughput sequencing data using alignment | ||
|created by=Marcel Martin | |created by=Marcel Martin | ||
| − | |created at=TU Dortmund, Science for Life Laboratory, | + | |created at=TU Dortmund, Science for Life Laboratory, |
|maintained=Yes | |maintained=Yes | ||
|email address=marcel.martin@scilifelab.se | |email address=marcel.martin@scilifelab.se | ||
|input format=FASTA, FASTQ, CSFASTA/CSQUAL (ABI SOLiD) | |input format=FASTA, FASTQ, CSFASTA/CSQUAL (ABI SOLiD) | ||
|output format=FASTQ | |output format=FASTQ | ||
| − | |language=Python, | + | |language=Python, Cython |
|licence=MIT, | |licence=MIT, | ||
}} | }} | ||
Latest revision as of 12:53, 7 November 2014
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Application data |
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| Created by | Marcel Martin |
|---|---|
| Created at | TU Dortmund, Science for Life Laboratory |
| Maintained? | Yes |
| Input format(s) | FASTA, FASTQ, CSFASTA/CSQUAL (ABI SOLiD) |
| Output format(s) | FASTQ |
| Programming language(s) | Python, Cython |
| Licence | MIT |
| Contact: | marcel.martin@scilifelab.se |
Summary: remove adapter sequences from high-throughput sequencing data using alignment
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