Difference between revisions of "TagDust"
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=TagDust, a program identifying artifactual sequences in large sequencing runs. Given a user-defined cutoff for the false discovery rate (FDR), TagDust identifies all reads explainable by combinations and partial matches to known sequences used during library preparation. | |sw summary=TagDust, a program identifying artifactual sequences in large sequencing runs. Given a user-defined cutoff for the false discovery rate (FDR), TagDust identifies all reads explainable by combinations and partial matches to known sequences used during library preparation. | ||
| − | |bio method=Sequencing | + | |bio method=Sequencing quality control |
|bio tech=Illumina, | |bio tech=Illumina, | ||
|created by=Timo Lassmann | |created by=Timo Lassmann | ||
Revision as of 06:43, 25 August 2015
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Application data |
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| Created by | Timo Lassmann |
|---|---|
| Principal bioinformatics method(s) | Sequencing quality control |
| Technology | Illumina |
| Created at | RIKEN Yokohama Institute |
| Maintained? | Yes |
| Input format(s) | FASTA, FASTQ |
| Output format(s) | FASTA, FASTQ |
| Programming language(s) | C |
| Licence | GPL |
| Operating system(s) | Solaris, UNIX, Linux |
Summary: TagDust, a program identifying artifactual sequences in large sequencing runs. Given a user-defined cutoff for the false discovery rate (FDR), TagDust identifies all reads explainable by combinations and partial matches to known sequences used during library preparation.
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Links
References
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