SHREC
Revision as of 06:39, 25 August 2015 by LuisPedroCoelho (talk | contribs) (Text replace - "Sequencing Quality Control" to "Sequencing quality control")
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Application data |
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| Principal bioinformatics method(s) | Sequencing quality control, Error correction |
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| Technology | Illumina |
| Maintained? | Yes |
| Input format(s) | FASTA, FASTQ |
| Programming language(s) | Java |
Summary: A new algorithm for correcting errors in short-read data that uses a generalized suffix trie on the read data as the underlying data structure
"Error: no local variable "counter" was set." is not a number.
SHREC is a JAVA program to correct sequencing errors in short-read hight-throughput data, such as those generated by the Illumina Genome Analyzer.
Links
References
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Search for "SHREC" in the SEQanswers forum / BioStar or:
| Web Search | Wiki Sites | Scientific |
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