Ngs-pipeline

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Application data

Created by Denis Reshetov
Biological application domain(s) Personal genomics, Epigenomics, Structural variation, Indel detection, SNP detection
Principal bioinformatics method(s) Read mapping, Sequence annotation
Technology Illumina, ABI SOLiD
Created at VIGG RAS
Maintained? Yes
Input format(s) BAM, (Compressed) FASTQ, FASTQ, CSFASTA/CSQUAL (ABI SOLiD)
Output format(s) BAM, VCF
Programming language(s) Perl
Licence GPLv3
Operating system(s) Linux

Summary: Complete solution for human re-sequencing projects

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Description

Complete solution for human re-sequencing projects.





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