BWA

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Application data

Created by Heng Li and Richard Durbin
Biological application domain(s) Read alignment, Mapping
Principal bioinformatics method(s) FM-Index
Technology Sanger, Solexa/Illumina, 454, ABI SOLiD
Created at Sanger Institute
Maintained? Yes
Input format(s) compressed/uncompressed fastq/fasta
Output format(s) SAM
Software features Gapped alignment, paired-end mapping
Programming language(s) C
Licence GPLv3, MIT
Operating system(s) Unix

Summary: Fast, accurate, memory-efficient aligner for short and long sequencing reads

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Links


References

  1. . 2009. Bioinformatics


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