Browse data: Bioinformatics application
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Bioinformatics application > Language:
Pilot Script 
& Operating system:
Windows
& Technology:
Illumina
& Bioinformatics method:
Analysis pipeline
& Biological domain:
SNP detection
& Operating system:
Windows
& Technology:
Illumina
& Bioinformatics method:
Analysis pipeline
& Biological domain:
SNP detection Click on one or more items below to narrow your results.
Language: (Click arrow to add another value)
Operating system: (Click arrow to add another value)
*NIX ·
10 ·
10.8 ·
8 ·
AIX ·
All ·
Amazon EC2 ·
Compaq Alpha ·
Cross-Platform ·
GNU/Linux ·
IRIX ·
Linux ·
Linux 64 ·
Linux CentOS 6.5 ·
Linux Ubuntu 12.04 ·
Mac ·
Mac OS X ·
Mac OS X 10.7 ·
Mac OS X; x86 64 ·
Mac OS X; x86 64 ·
OS X ·
OSX ·
OpenBSD ·
POSIX ·
Requires Tomcat server ·
Solaris ·
UNIX ·
Unix ·
Unix-like ·
Web ·
Windows ·
Windows (Cygwin) ·
Windows 7 64-bit or Higher ·
Windows 7 or Higher ·
Windows XP ·
all supporting JVM ·
any ·
browser based ·
cloud ·
cross-platform ·
iOS ·
interoperable ·
or 10.9 ·
or 10.9 with Parallels Desktop ·
platform-independent ·
tested for Linux (Ubuntu) ·
Other ·
None
Maintained:
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Licence:
(There are no values for this filter)
Technology: (Click arrow to add another value)
454 ·
ABI SOLiD ·
Affymetrix ·
Agilent ·
All ·
Any ·
Any HTS ·
Any sequencing platform ·
Anything that can be assembled with Celera or Newbler ·
Complete Genomics ·
GenePix ·
Helicos ·
Illumina ·
Illumina HiSeq ·
Illumina HiSeq X Ten ·
Illumina HiSeq/NextSeq/MiSeq/Solexa ·
Illumina Solexa ·
Ion Torrent ·
Ion proton ·
MiSeq ·
NGS ·
PacBio ·
Pacific Biosciences ·
Pyrosequencing (QIAGEN) ·
Roche ·
Roche 454 ·
Roche NimbleGen ·
SOLiD ·
Sanger ·
all ·
Other ·
None
Bioinformatics method: (Click arrow to add another value)
Ab-initio gene prediction ·
Adapter removal ·
Analysis ·
Analysis pipeline ·
And more... ·
Annotation ·
Assembly ·
Base-calling ·
Biological interpretation ·
Bisulfite mapping ·
Chromatogram visualisation ·
Classification ·
Clustering ·
Collapsing methods ·
Comparative genomics ·
Conversion ·
Correlation ·
DNA barcoding ·
Data retrieval ·
De-novo assembly ·
De novo mutation detection ·
Differential Binding ·
Differential binding sites ·
Differential expression analysis ·
Differentially expressed gene identification ·
Endpoint Management ·
Enrichment ·
Exome analysis ·
Expectation Maximisation ·
File reformatting ·
Filtering ·
Format conversion ·
Formatting ·
Functional analysis ·
Functional enrichment ·
Gene expression analysis ·
Gene expression profiling ·
Gene set testing ·
Genetic variation analysis ·
Genome-wide association study ·
Genome comparison ·
Genome indexing ·
Genome indexing (Burrows-Wheeler) ·
Genome indexing (suffix arrays) ·
Genome visualisation ·
Genomic region matching ·
Genomics ·
Genotyping ·
Gibbs sampling ·
Global test ·
Graph reduction ·
Hadoop ·
Haplotype inference ·
Haplotype reconstruction ·
Heat map generation ·
Hidden Markov Model ·
Indel detection ·
Integrated solution ·
Joint significance test ·
K-mer counting ·
Laboratory information management ·
Learning algorithm ·
Local sequence alignment ·
Localised reassembly ·
Mapping ·
Metabolic network modelling ·
Metagenomic Assembly ·
Methylation analysis ·
Methylation calling ·
MiRNA analysis ·
MicroRNA detection ·
Modelling and simulation ·
Mutation detection ·
Nucleic acid sequence feature detection ·
Omnibus test ·
Ontology comparison ·
PCR primer design ·
Pathway or network analysis ·
Peak calling ·
Peptide mass fingerprint ·
Phase pattern prediction ·
Plotting and rendering ·
Post-analysis ·
Primer removal ·
Quality assessement ·
Quality control ·
RNA-Seq analysis ·
RRNA filtering ·
Read alignment ·
Read depth analysis ·
Read mapping ·
Read pre-processing ·
Read summarisation ·
Regression analysis ·
Remediation ·
Repeat sequence organisation analysis ·
SNP annotation ·
SNP calling ·
SNP detection ·
Sample Barcoding ·
Scaffolding ·
Security ·
Sequence alignment ·
Sequence alignment analysis ·
Sequence alignment comparison ·
Sequence alignment visualisation ·
Sequence analysis ·
Sequence annotation ·
Sequence assembly ·
Sequence assembly (de-novo assembly) ·
Sequence assembly editing ·
Sequence assembly validation ·
Sequence assembly visualisation ·
Sequence clustering ·
Sequence contamination filtering ·
Sequence error correction ·
Sequence functional annotation ·
Sequence motif comparison ·
Sequence motif discovery ·
Sequence motif recognition ·
Sequence parsing ·
Sequence redundancy removal ·
Sequence trimming ·
Sequencing quality control ·
Signal ·
Simulation ·
Species frequency estimation ·
Split-read mapping ·
Standardisation and normalisation ·
Statistical analysis ·
Statistical calculation ·
Statistical calculation and probability ·
Statistical testing ·
Taxonomic profiling ·
Transcriptome assembly ·
Translated nucleotide search ·
Variant calling ·
Variant classification ·
Variant prioritisation ·
Viewer ·
Visualisation ·
Visualisation Quality assessement ·
Whole genome breakend assembly ·
Workflows ·
Other ·
None
Biological domain: (Click arrow to add another value)
Alternative splicing ·
Biomedical Sciences ·
CLIP-Seq ·
Cancer biology ·
ChIP-Seq ·
ChIP-exo ·
ChIP-on-chip ·
ChIP-seq ·
Chromatin ·
Clone verification ·
Community analysis ·
Comparative genomics ·
Copy number estimation ·
DNA ·
DNA-Seq ·
DNA methylation ·
DNA packaging ·
DNA transcription ·
DNase-seq ·
Data handling ·
De-novo assembly ·
De novo mutation detection ·
Epidemiology ·
Epigenetics ·
Epigenomics ·
Exome ·
Exome analysis ·
Exome and whole genome variant detection ·
Exome capture ·
Functional genomics ·
Gene expression ·
Gene expression analysis ·
Gene regulation ·
Gene structure ·
Genetic variation ·
Genetic variation analysis ·
Genetics ·
Genome Wide Association Studies ·
Genomic assembly ·
Genomics ·
Genotyping ·
HITS-CLIP ·
High-throughput sequencing ·
ICLIP ·
Immunoprecipitation experiment ·
In vitro selection ·
Indel detection ·
Laboratory information management ·
Machine learning ·
Mapping ·
MeDIP-Seq ·
Metabolic pathways ·
Metabolic reconstruction ·
Metagenomic sequencing ·
Metagenomics ·
Meth-Seq ·
Methyl-Seq ·
MicroRNA-Seq ·
Microbial Ecology ·
Microbial Surveillance ·
Microbiome ·
Mobile genetic elements ·
Next Generation Sequencing ·
PAR-CLIP ·
Pathway or network analysis ·
Personalised medicine ·
Phylogenetics ·
Population Genomics ·
Population genetics ·
Protein interactions ·
Protein structure analysis ·
Public health and epidemiology ·
Quality control ·
RNA ·
RNA-Seq ·
RNA-Seq alignment ·
RNA-Seq quantification ·
RNA splicing ·
Rarefaction ·
Read alignment ·
Read binning ·
Regulatory RNA ·
Regulatory genomics ·
Resequencing ·
SNP ·
SNP detection ·
SNPs ·
Sequence alignment ·
Sequence analysis ·
Sequence annotation ·
Sequence assembly ·
Sequence assembly (de-novo assembly) ·
Sequence assembly (de novo assembly) ·
Sequence functional annotation ·
Sequence motifs ·
Sequencing ·
Simulation experiment ·
Small RNA-Seq ·
Small RNA Sequencing ·
Statistical calculation ·
Storage ·
Structural variation ·
Transcription factors and regulatory sites ·
Transcriptome assembly ·
Transcriptomics ·
Viral genomics ·
Whole-genome sequencing ·
Whole genome resequencing ·
Workflows ·
Other ·
None
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