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Short description:
Please summarise the application in a few sentences. Avoid links here. featureCounts is a very efficient read quantifier. It can be used to summarize RNA-seq reads and gDNA-seq reads to a variety of genomic features such as genes, exons, promoters, gene bodies and genomic bins. It is included in the Bioconductor Rsubread package and also in the SourceForge Subread package.
Software version:
Biological application domain(s) (Phylogenetics, Genomics, ...):
Next Generation Sequencing
Principal bioinformatics method(s) (Assembly, Mapping, ...):
Read summarisation,
Technology (Sanger, Illumina, 454, SOLiD, Ion Torrent, ...):
Illumina, 454, ABI SOLiD, Ion Torrent,
Interface (Command line, Web UI, Desktop GUI, SOAP WS, HTTP WS, API, QL):
Resource type (Command-line tool, Web application, Desktop application, Script, Suite, Workbench, Database portal, Workflow, Plug-in, Library, Web API, Web service, SPARQL endpoint):
Australia The Walter and Eliza Hall Institute,
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