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Short description:
Please summarise the application in a few sentences. Avoid links here. de novo and reference assembly of Roche/454, Illumina and SOLiD data. Uses a novel Condensation Assembly Tool approach where reads are joined via "anchors" into mini-contigs before assembly which reduces sequencing errors. Requires Win or MacOS.
Software version:
Biological application domain(s) (Phylogenetics, Genomics, ...):
Sequence assembly (de novo assembly), Metagenomics, SNP detection, Indel detection, Exome capture,
Principal bioinformatics method(s) (Assembly, Mapping, ...):
Technology (Sanger, Illumina, 454, SOLiD, Ion Torrent, ...):
Illumina, 454, ABI SOLiD
Interface (Command line, Web UI, Desktop GUI, SOAP WS, HTTP WS, API, QL):
Resource type (Command-line tool, Web application, Desktop application, Script, Suite, Workbench, Database portal, Workflow, Plug-in, Library, Web API, Web service, SPARQL endpoint):
SoftGenetics LLC
Link: http://softgenetics.com/NextGENe.html Category: Integrated solutions
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