You do not have permission to edit this page, for the following reason:
The action you have requested is limited to users in the group: Users.
Short description:
Please summarise the application in a few sentences. Avoid links here. Comprehensive analysis pipelines powered with unique mapping speed and sensitivity deliver deep genomic analysis in variant detection and metagenomic applications with Illumina, Ion Torrent, Complete Genomics and Roche 454 data sets.
Software version:
Biological application domain(s) (Phylogenetics, Genomics, ...):
Exome and whole genome variant detection, Metagenomics, SNP detection, Indel detection
Principal bioinformatics method(s) (Assembly, Mapping, ...):
Read mapping, Sequence alignment, translated nucleotide search, k-mer counting, species frequency estimation, Sequence contamination filtering, Read depth analysis
Technology (Sanger, Illumina, 454, SOLiD, Ion Torrent, ...):
Illumina, Ion Torrent, Complete Genomics, 454,
Interface (Command line, Web UI, Desktop GUI, SOAP WS, HTTP WS, API, QL):
Resource type (Command-line tool, Web application, Desktop application, Script, Suite, Workbench, Database portal, Workflow, Plug-in, Library, Web API, Web service, SPARQL endpoint):
Real Time Genomics.
== Description == <!-- Describe the application in the space below --> RTG Core (upon which RTG Investigator / RTG Variant / RTG Metagenomics / RTG Tools are built) is ready-to-run NGS sequence analysis software that quickly delivers the excellent results necessary for great science. Unparalleled mapping speed and sensitivity powers comprehensive variant detection and metagenomic analysis pipelines that support Illumina, Ion Torrent, Complete Genomics and Roche 454 data. This commercial software is also available free for non-commercial use, with source code on github. The utility package RTG Tools, which includes vcfeval for haplotype-aware variant comparison, is BSD licensed, also on github. <!-- -->
Once you save the form, you will have the chance to add links and references.
Summary of edit
This is a minor edit Watch this page
Cancel