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Short description:
Please summarise the application in a few sentences. Avoid links here. Desktop alignment software now with plugins to MAQ and GSNAP for NGS sequence date
Software version:
Biological application domain(s) (Phylogenetics, Genomics, ...):
Sequence assembly (de novo assembly), SNP detection
Principal bioinformatics method(s) (Assembly, Mapping, ...):
Sequence assembly, Sequence alignment
Technology (Sanger, Illumina, 454, SOLiD, Ion Torrent, ...):
454, Illumina, ABI SOLiD, Ion Torrent, Sanger
Interface (Command line, Web UI, Desktop GUI, SOAP WS, HTTP WS, API, QL):
Resource type (Command-line tool, Web application, Desktop application, Script, Suite, Workbench, Database portal, Workflow, Plug-in, Library, Web API, Web service, SPARQL endpoint):
== Description == <!-- Describe the application in the space below --> Sequencher 5.0 has been updated to deal with NGS data. It now uses Tablet, MAQ, and GSNAP as plugins to deal with NGS data. Requires cygwin libraries on Windows in order to run plugins. <!-- -->
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