You do not have permission to edit this page, for the following reason:
The action you have requested is limited to users in the group: Users.
Short description:
Please summarise the application in a few sentences. Avoid links here. Tripal is a collection of open-source, freely-available Drupal modules that serves as a web interface for a GMOD Chado database. It is designed to allow anyone with genomic data to quickly create an online genomic database using community supported tools. Tripal is part of the open-source tool collection available through the Generic Model Organism Database (GMOD) project.
Software version:
Biological application domain(s) (Phylogenetics, Genomics, ...):
Genomics, Genetics
Principal bioinformatics method(s) (Assembly, Mapping, ...):
Visualisation,
Technology (Sanger, Illumina, 454, SOLiD, Ion Torrent, ...):
Interface (Command line, Web UI, Desktop GUI, SOAP WS, HTTP WS, API, QL):
Resource type (Command-line tool, Web application, Desktop application, Script, Suite, Workbench, Database portal, Workflow, Plug-in, Library, Web API, Web service, SPARQL endpoint):
Washington State University, [http://www.abc.com Clemson University] Genomics Institute, Generic Model Organism Database project
== Description == Tripal is a web front end for Chado databases, based on the Drupal content management system. Tripal leverages many of the features of Drupal--ability to search and edit content, detail pages for different types of content, customizable page layouts, and so on--to provide users with an intuitive, flexible interface to a database. Features and advantages of Tripal: *Allows rapid development of an online genomic database. *Site administrators can add non-biological content to their sites and allow editing of content by non-technical users. *Integrates directly with GMOD Chado. *Provides visualizations for Chado "modules" such as features, analyses, libraries, stocks, and others. *Provides an interface for easy editing/updating of data in Chado. *Provides full text and categorical search capabilities for Chado content. *Can integrate GMOD tools such as CMap and GBrowse. *Integrates with powerful Drupal features like Drupal views and panels *Provides fully customizable PHP-based templates to allow users to change the look and feel of their installation *Web-based management of Chado (i.e. installation of Chado v1.11 and loading of ontologies) *Loaders for GFF3 and FASTA format files. *Provides an API to allow for creation of custom extensions by anyone. <!-- -->
Once you save the form, you will have the chance to add links and references.
Summary of edit
This is a minor edit Watch this page
Cancel