Difference between revisions of "Ngs-pipeline"
m (Text replace - "([= ])[Mm]apping," to "$1Read mapping,") |
|||
| Line 1: | Line 1: | ||
{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=Complete solution for human re-sequencing projects | |sw summary=Complete solution for human re-sequencing projects | ||
| − | |bio domain=Personal genomics, Epigenomics, Structural variation, | + | |bio domain=Personal genomics, Epigenomics, Structural variation, InDel discovery, SNP discovery, |
| − | |bio method=Read mapping | + | |bio method=Read mapping, Sequence annotation, |
|bio tech=Illumina, ABI SOLiD, | |bio tech=Illumina, ABI SOLiD, | ||
|created by=Denis Reshetov | |created by=Denis Reshetov | ||
Revision as of 16:32, 2 December 2015
|
Application data |
|
| Created by | Denis Reshetov |
|---|---|
| Biological application domain(s) | Personal genomics, Epigenomics, Structural variation, InDel discovery, SNP discovery |
| Principal bioinformatics method(s) | Read mapping, Sequence annotation |
| Technology | Illumina, ABI SOLiD |
| Created at | VIGG RAS |
| Maintained? | Yes |
| Input format(s) | BAM, (Compressed) FASTQ, FASTQ, CSFASTA/CSQUAL (ABI SOLiD) |
| Output format(s) | BAM, VCF |
| Programming language(s) | Perl |
| Licence | GPLv3 |
| Operating system(s) | Linux |
Summary: Complete solution for human re-sequencing projects
"Error: no local variable "counter" was set." is not a number.
Description
Complete solution for human re-sequencing projects.
Links
References
none specified
To add a reference for Ngs-pipeline, enter the PubMed ID in the field below and click 'Add'.
[ edit box ]
Search for "Ngs-pipeline" in the SEQanswers forum / BioStar or:
| Web Search | Wiki Sites | Scientific |
|---|---|---|
