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|sw summary=de De novo and reference assembly of Sanger, 454, Solexa, Helicos, SNP and SOLiD data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP small indel detection, browser and other features. Runs on Windows, Mac OS X and Linuxannotation.|bio domain=Genomics, Whole Genome Resequencinggenome resequencing, De-Sequence assembly (de novo assembly), SNP discoverydetection, InDel discoveryIndel detection, ChIP-seq, RNA-Seq, InDel discoveryRegulatory RNA, RNATranscriptomics, Mapping|bio method=Read mapping, Sequence assembly, Sequence alignment, Ab-initio gene prediction, Adapter removal, Annotation, Bisulfite mapping, SNP calling, Sequence assembly (de-novo assembly), Heat map generation, Sequence assembly validation|bio tech=454, Illumina, ABI SOLiD, Helicos, Sanger, Ion Torrent,|created by=Knudsen T, Knudsen B|created at=http://www.clcbio.com|maintained=Yes|input format=FASTA, FASTQ, GenBank, SAM, BAM, Illumina Bustard, ELAND, CSFASTA/CSQUAL (ABI SOLiD)|output format=FASTA, FASTQ, GFF, GenBank, SAM, BAM, ACE, Nexus, CSV, PDF, XLS,|sw feature=Advanced and user-friendly analyses of genomic, transcriptomic, and epigenomic NGS data in a graphical user-interface. Wizard driven tools and a freely available developer toolkit, SIMD implementation, multi-Seqthreading, hybrid assembly, Integrated solution,|language=Java, C++|library=OPEN CLC API for plug in development|licence=Commercial,|os=Windows, Mac OS X, Linux

Link: http:Server//wwwenterprise options for scalability of computation and storage.clcbio Package includes many more common-place bioinformatics tools such as BLAST and Clustal alignments as well.com/index.php?id=1240 Category: Integrated solutions{{Links}}{{References}}{{Link box}}