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CLCbio Genomics Workbench

249 bytes added, 10:16, 11 January 2016
m
Text replace - "ChIP-Seq" to "ChIP-seq"
{{Bioinformatics application
|sw summary=De novo and reference assembly SNP and small indel detection and annotation.
|bio domain=Genomics, Whole Genome Resequencinggenome resequencing, De-Sequence assembly (de novo assembly), SNP discoverydetection, InDel discoveryIndel detection, ChIP-Seqseq, RNA-Seq Alignment, miRNARegulatory RNA, Transcriptomics, Mapping|bio method=MappingRead mapping, Sequence assembly, Sequence alignment, Ab-initio gene prediction, Adapter removal, AssemblyAnnotation, Alignment Bisulfite mapping, ColorspaceSNP calling, Sequence assembly (de-novo assembly), Heat map generation, Sequence assembly validation|bio tech=454, Illumina, ABI SOLiD, Helicos, Sanger, Ion Torrent,
|created by=Knudsen T, Knudsen B
|created at=http://www.clcbio.com
|maintained=Yes
|input format=FASTA, FASTQ, GenBank, SAM, BAM, Illumina Bustard, ELAND, CSFASTA/CSQUAL (ABI SOLiD)
|output format=FASTA, FASTQ, GFF, GenBank, SAM, BAM, ACE, Nexus, CSV, PDF, XLS,
|sw feature=Advanced and user-friendly analyses of genomic, transcriptomic, and epigenomic NGS data in a graphical user-interface. Wizard driven tools and a freely available developer toolkit, SIMD implementation, multi-threading, hybrid assembly, Integrated solution,
|language=Java, C++

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