Difference between revisions of "DNA Chromatogram Explorer"
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{{Bioinformatics application | {{Bioinformatics application | ||
| − | |sw summary=DNA Chromatogram Explorer is a Windows Explorer clone dedicated to DNA sequence analysis and manipulation | + | |sw summary=DNA Chromatogram Explorer is a Windows Explorer clone dedicated to DNA sequence analysis and manipulation. |
|sw logo=http://www.dnabaser.com/download/chromatogram-explorer/icon.png | |sw logo=http://www.dnabaser.com/download/chromatogram-explorer/icon.png | ||
| − | |bio method= | + | |bio domain=sequence analysis |
| + | |bio method=Chromatogram visualisation, File reformatting, | ||
|bio tech=Sanger | |bio tech=Sanger | ||
| − | | | + | |interface=Desktop GUI |
| − | |created at= | + | |resource type=Desktop application, |
| + | |created at=Heracle BioSoft SRL | ||
|maintained=Yes | |maintained=Yes | ||
|input format=FASTA, SCF, ABI, GenBank, SEQ, TXT | |input format=FASTA, SCF, ABI, GenBank, SEQ, TXT | ||
|output format=FASTA, SCF, SEQ, TXT | |output format=FASTA, SCF, SEQ, TXT | ||
|sw feature=Portable. Does not require installation. Can run from USB stick. Only 1MB., | |sw feature=Portable. Does not require installation. Can run from USB stick. Only 1MB., | ||
| − | + | |licence=Freeware | |
| − | |licence= | ||
|os=Windows | |os=Windows | ||
}} | }} | ||
DNA Chromatogram Explorer is a Windows Explorer clone dedicated to DNA sequence analysis and manipulation. You can view the chromatograms while browsing through folders using its integrated file explorer. With a single click you can trim the low quality bases at the end of your samples. The Lite version of Chromatogram Explorer is freeware. | DNA Chromatogram Explorer is a Windows Explorer clone dedicated to DNA sequence analysis and manipulation. You can view the chromatograms while browsing through folders using its integrated file explorer. With a single click you can trim the low quality bases at the end of your samples. The Lite version of Chromatogram Explorer is freeware. | ||
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With DNA Chromatogram Explorer you can: | With DNA Chromatogram Explorer you can: | ||
| − | + | * Display sample's content as you browse through your folders | |
| − | + | * Highlight low quality regions | |
| − | + | * Manually trim low quality end | |
| − | + | * Automatically trim low quality ends (batch) | |
| − | + | * Convert between miscellaneous formats | |
| − | + | * View FASTA, SEQ, TXT samples | |
| − | + | * View SCF, ABI, AB, AB!, AB1 samples | |
| − | + | * View sample's properties & statistics | |
| − | + | * View quality values | |
| − | + | * Extract bases from chromatograms (copy to clipboard) | |
| − | + | * Disk operations (delete samples, move, etc) | |
| − | |||
{{Links}} | {{Links}} | ||
{{References}} | {{References}} | ||
{{Link box}} | {{Link box}} | ||
Latest revision as of 16:12, 1 November 2016
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Application data |
|
| Biological application domain(s) | sequence analysis |
|---|---|
| Principal bioinformatics method(s) | Chromatogram visualisation, File reformatting |
| Technology | Sanger |
| Created at | Heracle BioSoft SRL |
| Maintained? | Yes |
| Input format(s) | FASTA, SCF, ABI, GenBank, SEQ, TXT |
| Output format(s) | FASTA, SCF, SEQ, TXT |
| Software features | Portable. Does not require installation. Can run from USB stick. Only 1MB. |
| Interface type(s) | Desktop GUI |
| Resource type(s) | Desktop application |
| Licence | Freeware |
| Operating system(s) | Windows |
Summary: DNA Chromatogram Explorer is a Windows Explorer clone dedicated to DNA sequence analysis and manipulation. [[1]]
"Error: no local variable "counter" was set." is not a number.
DNA Chromatogram Explorer is a Windows Explorer clone dedicated to DNA sequence analysis and manipulation. You can view the chromatograms while browsing through folders using its integrated file explorer. With a single click you can trim the low quality bases at the end of your samples. The Lite version of Chromatogram Explorer is freeware.
With DNA Chromatogram Explorer you can:
- Display sample's content as you browse through your folders
- Highlight low quality regions
- Manually trim low quality end
- Automatically trim low quality ends (batch)
- Convert between miscellaneous formats
- View FASTA, SEQ, TXT samples
- View SCF, ABI, AB, AB!, AB1 samples
- View sample's properties & statistics
- View quality values
- Extract bases from chromatograms (copy to clipboard)
- Disk operations (delete samples, move, etc)
Links
References
none specified
To add a reference for DNA Chromatogram Explorer, enter the PubMed ID in the field below and click 'Add'.
[ edit box ]
Search for "DNA Chromatogram Explorer" in the SEQanswers forum / BioStar or:
| Web Search | Wiki Sites | Scientific |
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![[1]](http://www.dnabaser.com/download/chromatogram-explorer/icon.png%7C200px%7Cright){kind=link}