User contributions
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- 02:52, 5 January 2012 (diff | hist) . . (-31) . . TAPyR
- 02:50, 5 January 2012 (diff | hist) . . (+2) . . SeqSolve
- 02:50, 5 January 2012 (diff | hist) . . (-3) . . Genome Trax
- 02:49, 5 January 2012 (diff | hist) . . (+2) . . SHOREmap
- 02:49, 5 January 2012 (diff | hist) . . (+3) . . Shore
- 02:49, 5 January 2012 (diff | hist) . . (+3) . . Sequencher
- 02:49, 5 January 2012 (diff | hist) . . (-3) . . PerM
- 02:49, 5 January 2012 (diff | hist) . . (-2) . . Nexalign
- 02:48, 5 January 2012 (diff | hist) . . (-3) . . MIP Scaffolder (current)
- 02:48, 5 January 2012 (diff | hist) . . (+4) . . Golden Helix
- 02:48, 5 January 2012 (diff | hist) . . (+1) . . SHORTY
- 02:47, 5 January 2012 (diff | hist) . . (+4) . . GenomeJack
- 02:46, 5 January 2012 (diff | hist) . . (-8) . . Avadis NGS
- 02:46, 5 January 2012 (diff | hist) . . (-45) . . SeqSolve
- 04:52, 5 November 2011 (diff | hist) . . (+69) . . Publication/Paper (NAR 2012)/Corrections (→Q2)
- 19:56, 3 November 2011 (diff | hist) . . (+19) . . ConDeTri
- 17:15, 23 September 2011 (diff | hist) . . (+2,019) . . N 21447171 (Created page with "{{Reference |reference describes=DecGPU |pmid=21447171 |title=DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI. |year=2011 ...") (current)
- 17:14, 23 September 2011 (diff | hist) . . (+322) . . N DecGPU (Created page with "{{Bioinformatics application |sw summary=Parallel and distributed error correction algorithm for high-throughput short reads. |bio domain=De-novo assembly, |bio method=Error cor...")
- 17:10, 23 September 2011 (diff | hist) . . (+4) . . MUMmerGPU
- 22:23, 15 September 2011 (diff | hist) . . (+101) . . N PRICE/URL 0 (Created page with "{{URL |url describes=PRICE |type=Homepage |url=http://derisilab.ucsf.edu/software/price/index.html }}") (current)
- 22:22, 15 September 2011 (diff | hist) . . (+298) . . N PRICE (Created page with "{{Bioinformatics application |sw summary=PRICE uses paired-read information to iteratively increase the size of existing contigs. |bio method=Assembly, |language=C++ }} == Descr...")
- 18:15, 14 September 2011 (diff | hist) . . (+1,310) . . N 21646344 (Created page with "{{Reference |reference describes=BEADS |pmid=21646344 |title=Systematic bias in high-throughput sequencing data and its correction by BEADS. |year=2011 |journal=Nucleic Acids Res...") (current)
- 18:13, 14 September 2011 (diff | hist) . . (+281) . . N BEADS (Created page with "{{Bioinformatics application |sw summary=ChIP-Seq data normalization for Illumina |bio domain=ChIP-Seq, |bio method=Normalization |bio tech=Illumina }} == Description == <!-- D...")
- 18:12, 14 September 2011 (diff | hist) . . (+2,062) . . N 21653520 (Created page with "{{Reference |reference describes=PiCall |pmid=21653520 |title=A probabilistic method for the detection and genotyping of small indels from population-scale sequence data. |year=2...") (current)
- 18:11, 14 September 2011 (diff | hist) . . (+108) . . N PiCall/URL 0 (Created page with "{{URL |url describes=PiCall |type=Homepage |url=http://polymorphism.scripps.edu/~vbansal/software/piCALL/ }}")
- 18:09, 14 September 2011 (diff | hist) . . (+290) . . N PiCall (Created page with "{{Bioinformatics application |sw summary=Identifies short indel polymorphisms in population sequencing data |bio domain=InDel discovery, Population genetics, }} == Description =...")
- 18:08, 14 September 2011 (diff | hist) . . (+1,251) . . N 21659319 (Created page with "{{Reference |reference describes=MapDamage |pmid=21659319 |title=mapDamage: testing for damage patterns in ancient DNA sequences. |year=2011 |journal=Bioinformatics |author=Ginol...") (current)
- 18:07, 14 September 2011 (diff | hist) . . (+107) . . N MapDamage/URL 0 (Created page with "{{URL |url describes=MapDamage |type=Source code |url=http://geogenetics.ku.dk/all_literature/mapdamage/ }}")
- 18:07, 14 September 2011 (diff | hist) . . (+37) . . MapDamage
- 18:06, 14 September 2011 (diff | hist) . . (+242) . . N MapDamage (Created page with "{{Bioinformatics application |sw summary=Identifies DNA damage patterns in ancient DNA |bio domain=Ancient DNA }} == Description == <!-- Describe the application in the space be...")
- 18:05, 14 September 2011 (diff | hist) . . (+939) . . N 21689413 (Created page with "{{Reference |reference describes=Sniper |pmid=21689413 |title=Sniper: improved SNP discovery by multiply mapping deep sequenced reads. |year=2011 |journal=Genome Biology |author...") (current)
- 18:04, 14 September 2011 (diff | hist) . . (+97) . . N Sniper/URL 0 (Created page with "{{URL |url describes=Sniper |type=Homepage |url=http://kim.bio.upenn.edu/software/sniper.shtml }}") (current)
- 18:04, 14 September 2011 (diff | hist) . . (+244) . . N Sniper (Created page with "{{Bioinformatics application |sw summary=SNP discovery utilizing multi-mapping reads |bio domain=SNP discovery, }} == Description == <!-- Describe the application in the space ...")
- 18:02, 14 September 2011 (diff | hist) . . (+2,532) . . N 21645377 (Created page with "{{Reference |reference describes=CloudAligner |pmid=21645377 |title=CloudAligner: A fast and full-featured MapReduce based tool for sequence mapping. |year=2011 |journal=BMC Res ...") (current)
- 17:59, 14 September 2011 (diff | hist) . . (+107) . . N CloudAligner/URL 1 (Created page with "{{URL |url describes=CloudAligner |type=Analysis server |url=http://mine.cs.wayne.edu:8080/CloudAligner/ }}") (current)
- 17:59, 14 September 2011 (diff | hist) . . (+96) . . N CloudAligner/URL 0 (Created page with "{{URL |url describes=CloudAligner |type=Source code |url=http://cloudaligner.sourceforge.net/ }}") (current)
- 17:58, 14 September 2011 (diff | hist) . . (+232) . . N CloudAligner (Created page with "{{Bioinformatics application |sw summary=Hadoop-based short read aligner |bio method=Mapping, Hadoop }} == Description == <!-- Describe the application in the space below --> ...")
- 17:58, 14 September 2011 (diff | hist) . . (+678) . . N 21697132 (Created page with "{{Reference |reference describes=SEAL |pmid=21697132 |title=SEAL: a distributed short read mapping and duplicate removal tool. |year=2011 |journal=Bioinformatics |author=Pireddu ...") (current)
- 17:56, 14 September 2011 (diff | hist) . . (+88) . . N SEAL/URL 0 (Created page with "{{URL |url describes=SEAL |type=Source code |url=http://biodoop-seal.sourceforge.net/ }}")
- 17:55, 14 September 2011 (diff | hist) . . (+237) . . N SEAL (Created page with "{{Bioinformatics application |sw summary=Read mapper and duplicate remover. |bio method=Mapping, Hadoop, }} == Description == <!-- Describe the application in the space below -...")
- 17:54, 14 September 2011 (diff | hist) . . (+966) . . N 21828086 (Created page with "{{Reference |reference describes=ExomeCNV |pmid=21828086 |title=Exome Sequencing-Based Copy-Number Variation and Loss of Heterozygosity Detection: ExomeCNV |year=2011 |journal=B...") (current)
- 17:52, 14 September 2011 (diff | hist) . . (+83) . . ExomeCNV (→Description)
- 17:52, 14 September 2011 (diff | hist) . . (+11) . . ExomeCNV
- 17:51, 14 September 2011 (diff | hist) . . (+301) . . N ExomeCNV (Created page with "{{Bioinformatics application |sw summary=Identifies copy number variation from targeted exome sequencing data |bio domain=Targeted resequencing, Copy number estimation, }} == De...")
- 17:51, 14 September 2011 (diff | hist) . . (0) . . Spiral Genetics
- 17:50, 14 September 2011 (diff | hist) . . (+1,111) . . N 21851591 (Created page with "{{Reference |reference describes=PARalyzer |pmid=21851591 |title=PARalyzer: Definition of RNA binding sites from PAR-CLIP short-read sequence data. |year=2011 |journal=Genome Bio...") (current)
- 17:49, 14 September 2011 (diff | hist) . . (+111) . . N PARalyzer/URL 0 (Created page with "{{URL |url describes=PARalyzer |type=Homepage |url=http://www.genome.duke.edu/labs/ohler/research/PARalyzer/ }}") (current)
- 17:48, 14 September 2011 (diff | hist) . . (+584) . . N PARalyzer (Created page with "{{Bioinformatics application |sw summary=Tool to analyze cross-linking and immunoprecipitation data (CLIP) }} == Description == <!-- Describe the application in the space below ...")
- 17:46, 14 September 2011 (diff | hist) . . (+633) . . N 21840877 (Created page with "{{Reference |reference describes=ChimeraScan |pmid=21840877 |title=ChimeraScan: A tool for identifying chimeric transcription in sequencing data |year=2011 |journal=Bioinformatic...") (current)
- 17:45, 14 September 2011 (diff | hist) . . (+92) . . N ChimeraScan/URL 0 (Created page with "{{URL |url describes=ChimeraScan |type=Source code |url=http://chimerascan.googlecode.com }}") (current)
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