CloudAligner

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Application data

Principal bioinformatics method(s) Read mapping, Hadoop
Created at Wayne State University
Maintained? Maybe
Input format(s) FASTA, FASTQ
Output format(s) SAM
Programming language(s) Java
Licence GPL
Operating system(s) cloud

Summary: Hadoop-based short read aligner

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Description

A cloud based aligner which supports a wider range of features like Mismatch, Bisulfite and Paired-end Mapping.





Links


References

  1. . 2011. BMC Res Notes


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