MIP Scaffolder
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Application data |
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| Created by | L. Salmela |
|---|---|
| Principal bioinformatics method(s) | Scaffolding |
| Technology | ABI SOLiD, Illumina |
| Created at | University of Helsinki |
| Maintained? | Yes |
| Input format(s) | FASTQ, FASTA |
| Programming language(s) | C++, Perl |
| Software libraries | lp_solve, lemon |
| Operating system(s) | Linux |
Summary: MIP Scaffolder is a program for scaffolding contigs produced by fragment assemblers using mate pair data.
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