Difference between revisions of "A5"
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=A5 is an integrative pipeline for genome assembly that automates sequence data cleaning, error correction, assembly, and quality control by chaining a number of programs together with additional custom algorithms. | |sw summary=A5 is an integrative pipeline for genome assembly that automates sequence data cleaning, error correction, assembly, and quality control by chaining a number of programs together with additional custom algorithms. | ||
| − | |bio domain= | + | |bio domain=Sequence assembly, |
| − | |bio method= | + | |bio method=De-novo assembly, |
|bio tech=Illumina | |bio tech=Illumina | ||
|interface=Command line, | |interface=Command line, | ||
| − | |resource type=Command-line tool, | + | |resource type=Command-line tool, |
|created by=Andrew Tritt, Jonathan A. Eisen, Marc T. Facciotti, Aaron E. Darling | |created by=Andrew Tritt, Jonathan A. Eisen, Marc T. Facciotti, Aaron E. Darling | ||
|created at=University of California Davis | |created at=University of California Davis | ||
Latest revision as of 09:30, 2 November 2016
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Application data |
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| Created by | Andrew Tritt, Jonathan A. Eisen, Marc T. Facciotti, Aaron E. Darling |
|---|---|
| Biological application domain(s) | Sequence assembly |
| Principal bioinformatics method(s) | De-novo assembly |
| Technology | Illumina |
| Created at | University of California Davis |
| Maintained? | Yes |
| Interface type(s) | Command line |
| Resource type(s) | Command-line tool |
| Licence | GPLv3 |
| Operating system(s) | Linux, Mac OS X |
Summary: A5 is an integrative pipeline for genome assembly that automates sequence data cleaning, error correction, assembly, and quality control by chaining a number of programs together with additional custom algorithms.
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