Difference between revisions of "MUMmerGPU"
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=MUMmerGPU is a low cost, ultra-fast sequence alignment program designed to handle the increasing volume of data produced by new, high-throughput sequencing technologies. MUMmerGPU demonstrates that even memory-intensive applications can run significantly faster on the relatively low-cost GPU than on the CPU. | |sw summary=MUMmerGPU is a low cost, ultra-fast sequence alignment program designed to handle the increasing volume of data produced by new, high-throughput sequencing technologies. MUMmerGPU demonstrates that even memory-intensive applications can run significantly faster on the relatively low-cost GPU than on the CPU. | ||
| − | |bio domain=Alignment | + | |bio domain=Alignment |
| + | |bio method=GPU | ||
}} | }} | ||
Link: http://www.ncbi.nlm.nih.gov/pubmed/18070356 Category: Alignment | Link: http://www.ncbi.nlm.nih.gov/pubmed/18070356 Category: Alignment | ||
| + | {{Links}} | ||
| + | {{References}} | ||
| + | {{Link box}} | ||
Revision as of 15:17, 31 August 2010
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Application data |
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| Biological application domain(s) | Alignment |
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| Principal bioinformatics method(s) | GPU |
| Maintained? | Maybe |
Summary: MUMmerGPU is a low cost, ultra-fast sequence alignment program designed to handle the increasing volume of data produced by new, high-throughput sequencing technologies. MUMmerGPU demonstrates that even memory-intensive applications can run significantly faster on the relatively low-cost GPU than on the CPU.
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Link: http://www.ncbi.nlm.nih.gov/pubmed/18070356 Category: Alignment
Links
References
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