Difference between revisions of "RTG"
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| − | RTG Investigator is easy-to-operate sequence analysis software that delivers to genome center standards. Unparalleled mapping speed and sensitivity powers comprehensive variant detection and metagenomic analysis pipelines that support | + | RTG Investigator is easy-to-operate sequence analysis software that delivers to genome center standards. Unparalleled mapping speed and sensitivity powers comprehensive variant detection and metagenomic analysis pipelines that support Illumina, Complete Genomics and Roche 454 data sets. The software is available free for individual use. |
Revision as of 07:40, 21 June 2011
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Application data |
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| Biological application domain(s) | Exome and Whole genome variant detection, Metagenomics |
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| Principal bioinformatics method(s) | Mapping, Alignment, SNP/Indel calling, Translated nucleotide search, K-mer analysis, Species frequency estimation, Contaminant filtering |
| Technology | Illumina, Complete Genomics, Roche 454 |
| Created at | Real Time Genomics, Inc. |
| Maintained? | Yes |
| Input format(s) | FASTA, FASTQ, Complete Genomics |
| Output format(s) | SAM, BED, VCF |
| Licence | Commercial software, free for individual use |
| Operating system(s) | Linux, Mac OS X, Windows |
Summary: Unique mapping speed and sensitivity delivers to genome center standards through easy-to-operate variant detection and metagenomic analysis pipelines. 200px|right
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Description
RTG Investigator is easy-to-operate sequence analysis software that delivers to genome center standards. Unparalleled mapping speed and sensitivity powers comprehensive variant detection and metagenomic analysis pipelines that support Illumina, Complete Genomics and Roche 454 data sets. The software is available free for individual use.
Links
- RTG Homepage [ edit link ]
- RTG White Paper [ edit link ]
- RTG HOWTO [ edit link ]
References
To add a reference for RTG, enter the PubMed ID in the field below and click 'Add'.
[ edit box ]
Search for "RTG" in the SEQanswers forum / BioStar or:
| Web Search | Wiki Sites | Scientific |
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