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HI
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{{Bioinformatics application
|sw summary=Program for haplotype reconstruction from paired-end reads.
|bio method=Haplotype reconstruction
|bio tech=Illumina, |created by=Quan Long |created at=Sanger Institute,
|maintained=No
|input format=FASTQ, CIGAR
|output format=TXT, |language=Java,
}}
HI (Haplotype Improver) is a tool written in Java to improve the haplotype reconstructions of existing phasing tools.