Difference between revisions of "Nexalign"
| Line 2: | Line 2: | ||
|sw summary=Nexalign is a program to align millions of short reads from next-generation sequencing data sets to reference genomes | |sw summary=Nexalign is a program to align millions of short reads from next-generation sequencing data sets to reference genomes | ||
|bio method=Mapping, | |bio method=Mapping, | ||
| − | |bio tech=454, SOLiD, Illumina, | + | |bio tech=454, ABI SOLiD, Illumina, |
| − | |created by=Timo Lassmann, | + | |created by=Timo Lassmann, |
| − | |created at=RIKEN Yokohama Institute, | + | |created at=RIKEN Yokohama Institute, |
|maintained=No | |maintained=No | ||
| − | |input format=FASTA, | + | |input format=FASTA, |
| − | |output format=BED, GFF, TXT, | + | |output format=BED, GFF, TXT, |
| − | |language=C++, R, | + | |language=C++, R, |
|licence=GPL, | |licence=GPL, | ||
|os=UNIX, | |os=UNIX, | ||
Revision as of 02:49, 5 January 2012
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Application data |
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| Created by | Timo Lassmann |
|---|---|
| Principal bioinformatics method(s) | Mapping |
| Technology | 454, ABI SOLiD, Illumina |
| Created at | RIKEN Yokohama Institute |
| Maintained? | No |
| Input format(s) | FASTA |
| Output format(s) | BED, GFF, TXT |
| Programming language(s) | C++, R |
| Licence | GPL |
| Operating system(s) | UNIX |
Summary: Nexalign is a program to align millions of short reads from next-generation sequencing data sets to reference genomes
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