Difference between revisions of "RApiD"
(Created page with "{{Bioinformatics application |sw summary=Tools for processing restriction site associated DNA sequencing. }} == Description ==
<!-- Describe the application in the space below ...") |
|||
| Line 1: | Line 1: | ||
{{Bioinformatics application | {{Bioinformatics application | ||
| − | |sw summary=Tools for processing restriction site associated DNA sequencing. | + | |sw summary=Tools for processing restriction site associated DNA sequencing. |
| + | |language=Perl, C++ | ||
}} | }} | ||
== Description == | == Description == | ||
Revision as of 16:23, 14 September 2011
|
Application data |
|
| Maintained? | Maybe |
|---|---|
| Programming language(s) | Perl, C++ |
Summary: Tools for processing restriction site associated DNA sequencing.
"Error: no local variable "counter" was set." is not a number.
Description
Restriction site associated DNA sequencing, or RAD-Seq, is a sequencing strategy in which paired ends are generated in which one end maps to a defined restriction site whereas the other end is generated through random shearing. The restriction site end generates a tag which can be used to cluster the random ends, enabling assembly of those fragments in a targeted manner. If restriction sites are conserved, then RAD-Seq will sample the same regions in multiple individuals. RApiD is a set of tools for working with RAD-Seq data.
Links
References
To add a reference for RApiD, enter the PubMed ID in the field below and click 'Add'.
Search for "RApiD" in the SEQanswers forum / BioStar or:
| Web Search | Wiki Sites | Scientific |
|---|---|---|
