Difference between revisions of "LASTZ"
m (Text replace - "([= ])[Mm]apping," to "$1Read mapping,") |
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=A tool for (1) aligning two DNA sequences, and (2) inferring appropriate scoring parameters automatically | |sw summary=A tool for (1) aligning two DNA sequences, and (2) inferring appropriate scoring parameters automatically | ||
| − | |bio domain=Genomics, | + | |bio domain=Genomics, |
| − | |bio method=Read mapping, Alignment, | + | |bio method=Read mapping, Alignment, |
|created by=Harris B | |created by=Harris B | ||
|created at=Miller Lab at Penn State | |created at=Miller Lab at Penn State | ||
| + | |email address=lastz-users@lists.bx.psu.edu | ||
|input format=FASTA, HSX, others | |input format=FASTA, HSX, others | ||
|output format=LAV, AXT,MAF, SAM, CIGAR, others | |output format=LAV, AXT,MAF, SAM, CIGAR, others | ||
Revision as of 20:07, 3 December 2015
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Application data |
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| Created by | Harris B |
|---|---|
| Biological application domain(s) | Genomics |
| Principal bioinformatics method(s) | Read mapping, Alignment |
| Created at | Miller Lab at Penn State |
| Maintained? | Maybe |
| Input format(s) | FASTA, HSX, others |
| Output format(s) | LAV, AXT, MAF, SAM, CIGAR, others |
| Operating system(s) | Mac OS X, Linux |
| Contact: | lastz-users@lists.bx.psu.edu |
Summary: A tool for (1) aligning two DNA sequences, and (2) inferring appropriate scoring parameters automatically
"Error: no local variable "counter" was set." is not a number.
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