Difference between revisions of "Variant Effect Predictor"
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=Tool for predicting effects of variants for any genome in Ensembl. The web version is limited to 750 variants, but an API and Perl script are provided as well. | |sw summary=Tool for predicting effects of variants for any genome in Ensembl. The web version is limited to 750 variants, but an API and Perl script are provided as well. | ||
− | |bio domain=SNP | + | |bio domain=SNP, |
+ | |bio method=SNP annotation | ||
|created at=EBI | |created at=EBI | ||
|maintained=Yes | |maintained=Yes |
Latest revision as of 10:20, 11 January 2016
Application data |
|
Biological application domain(s) | SNP |
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Principal bioinformatics method(s) | SNP annotation |
Created at | EBI |
Maintained? | Yes |
Input format(s) | VCF |
Programming language(s) | Perl |
Contact: | helpdesk@ensembl.org |
Summary: Tool for predicting effects of variants for any genome in Ensembl. The web version is limited to 750 variants, but an API and Perl script are provided as well.
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Description
Each Ensembl genome has its own copy of Variant Effect Predictor. The web interface will enable analyzing 750 mutations at a time; larger sets require using the API.
Links
- Variant Effect Predictor Analysis server [ edit link ]
- Variant Effect Predictor Source code [ edit link ]
References
none specified
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