Difference between revisions of "Meraculous"
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|library=boost | |library=boost | ||
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Revision as of 12:19, 22 April 2012
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Application data |
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| Principal bioinformatics method(s) | Assembly |
|---|---|
| Maintained? | Maybe |
| Input format(s) | specialized format |
| Output format(s) | fasta |
| Software features | De novo assembly, scaffolding |
| Programming language(s) | Perl, C |
| Software libraries | boost |
Summary: De novo genome assembler from short reads
"Error: no local variable "counter" was set." is not a number.
Description
A novel assembler and scaffolder that uses an efficient hashing strategy. When compared on Pichia or E.coli it performed very well when compared to other de-novo assemblers. It was tested up to Arabidopsis genome size (~120MB) with simulated reads.
Links
References
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