DNA Baser

Application data
Created by	HeracleSoftware
Biological application domain(s)	Structural variants, SNP discovery
Principal bioinformatics method(s)	Assembly, Assembly editing, Sequence analysis
Technology	454, Sanger
Created at	HeracleSoftware
Maintained?	Yes
Input format(s)	ABI, FASTA, GBK, SCF, SEQ, FASTA, TXT, CSV
Output format(s)	ABI, FASTA, GBK, SCF, SEQ, FASTA, TXT
Software features	Portable. Does not require installation. Can run from USB stick. Only 3MB.
Programming language(s)	Mix
Licence	Shareware
Operating system(s)	Windows

Summary: Tool for manual and automatic sequence assembly, analysis, editing, sample processing, metadata integration, file format conversion and mutation detection. [[1]]

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DNA Baser Assembler is unique bioinformatics software for manual and automatic DNA sequence assembly, DNA sequence analysis, automatic sample processing, contig editing, metadata integration, file format conversion and mutation detection.

With DNA Baser Sequence Assembler, you can:

• Assemble multiple DNA samples or align to a reference sequence
• Batch assemble or align in groups of sequences by name
• Automatically end clip (sample low quality end trimming)
• Automatically trim vector sequences
• Import and analyze sequences from ABI, SCF, FASTA and SEQ
• View and edit sequence traces
• Mark specific regions (like discrepancies, low-quality areas in chromatograms) with visible colors and quickly navigate to these regions
• Convert between different file formats (ABI, SCF, FASTA, multi-FASTA, GBK...)