GeeFu

Application data
Biological application domain(s)	Genomics
Principal bioinformatics method(s)	Sequence assembly
Maintained?	Maybe
Programming language(s)	Ruby

Summary: Database tool for genomic assembly and feature data

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Description

Gee Fu is an instance of a Ruby-On-Rails web application on a feature database that provides web and console interfaces for input, visualisation of feature data via AnnoJ, access to data through a web-service interface, an API for direct data access by Ruby scripts and access to feature data stored in BAM files. Gee Fu provides a platform for storing and sharing different versions of an assembly and associated features that can be accessed and updated by bench biologists and bioinformaticians in ways that are easy and useful for each.

Links

• GeeFu Source code [ edit link ]

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References

1. . 2011. Bioinformatics

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