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Application data

Created by Thomas Wu, Colin Watanabe
Principal bioinformatics method(s) Sequence alignment, Read mapping
Created at Genentech
Maintained? Yes
Input format(s) (Compressed) FASTQ
Output format(s) SAM (or custom)
Programming language(s) C, Bourne shell
Operating system(s) UNIX

Summary: GMAP (Genomic Mapping and Alignment Program) for mRNA and EST Sequences.

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Links

References

  1. . 2005. Bioinformatics


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