TEQC

Application data
Biological application domain(s)	Targeted resequencing
Principal bioinformatics method(s)	Sequencing quality control
Maintained?	Maybe
Programming language(s)	R

Summary: Quality assessment of target enrichment experiments.

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Description

Quality measures comprise specificity and sensitivity of the capture, enrichment, per-target read coverage and its relation to hybridization probe characteristics, coverage uniformity and reproducibility, and read duplicate analysis. Several diagnostic plots allow visual inspection of the data quality.

Links

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References

1. . 2011. Bioinformatics

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