TEQC
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Application data |
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| Biological application domain(s) | Exome capture |
|---|---|
| Principal bioinformatics method(s) | Sequencing quality control |
| Maintained? | Maybe |
| Programming language(s) | R |
| Interface type(s) | Command line |
| Resource type(s) | Command-line tool |
Summary: Quality assessment of target enrichment experiments.
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Description
Quality measures comprise specificity and sensitivity of the capture, enrichment, per-target read coverage and its relation to hybridization probe characteristics, coverage uniformity and reproducibility, and read duplicate analysis. Several diagnostic plots allow visual inspection of the data quality.
Links
References
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| Web Search | Wiki Sites | Scientific |
|---|---|---|
