DNA Baser
Application data |
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Created by | HeracleSoftware |
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Principal bioinformatics method(s) | manual and automatic DNA sequence assembly, DNA sequence analysis, automatic sample processing, contig editing, metadata integration, file format conversion, mutation detection |
Technology | sanger, 454 |
Created at | HeracleSoftware, http://www.dnabaser.com |
Maintained? | Yes |
Input format(s) | ABI, FASTA, GBK, SCF, SEQ, FASTA, TXT, CSV |
Output format(s) | ABI, FASTA, GBK, SCF, SEQ, FASTA, TXT |
Software features | Portable. Does not require installation. Can run from USB stick. Only 3MB. |
Programming language(s) | Mix |
Licence | Shareware |
Operating system(s) | All Windows platforms |
Summary: DNA Baser Assembler is unique bioinformatics software for manual and automatic DNA sequence assembly, DNA sequence analysis, automatic sample processing, contig editing, metadata integration, file format conversion and mutation detection. [[1]]
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DNA Baser Assembler is unique bioinformatics software for manual and automatic DNA sequence assembly, DNA sequence analysis, automatic sample processing, contig editing, metadata integration, file format conversion and mutation detection.
With DNA Baser Sequence Assembler, you can:
* Assemble multiple DNA samples or align to a reference sequence * Batch assemble or align in groups of sequences by name * Automatically end clip (sample low quality end trimming) * Automatically trim vector sequences * Import and analyze sequences from ABI, SCF, FASTA and SEQ * View and edit sequence traces * Mark specific regions (like discrepancies, low-quality areas in chromatograms) with visible colors and quickly navigate to these regions * Convert between different file formats (ABI, SCF, FASTA, multi-FASTA, GBK...)