MUMmerGPU

Application data
Biological application domain(s)	Alignment
Principal bioinformatics method(s)	GPU
Maintained?	Maybe

Summary: MUMmerGPU is a low cost, ultra-fast sequence alignment program designed to handle the increasing volume of data produced by new, high-throughput sequencing technologies. MUMmerGPU demonstrates that even memory-intensive applications can run significantly faster on the relatively low-cost GPU than on the CPU.

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Link: http://www.ncbi.nlm.nih.gov/pubmed/18070356 Category: Alignment

Links

• MUMmerGPU Homepage [ edit link ]

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References

1. . 2007. BMC Bioinformatics
2. . 2009. Parallel Comput

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