ArrayStar
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Application data |
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| Biological application domain(s) | Gene expression analysis |
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| Principal bioinformatics method(s) | Differential expression analysis, Ontology comparison, Genetic variation analysis, Statistical calculation |
| Technology | Affymetrix, Roche NimbleGen, Agilent, GenePix, Illumina |
| Created at | http://www.dnastar.com |
| Maintained? | Yes |
| Licence | Commercial |
| Operating system(s) | Windows 7 64-bit or Higher, Mac OS X 10.7, 10.8, or 10.9 with Parallels Desktop |
Summary: ArrayStar is an easy-to-use gene expression analysis software package that offers powerful visualization and statistical tools to help you analyze your microarray data.
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Description
ArrayStar® is an application within Lasergene Genomics Suite for analyzing sequence variation across groups of genomic samples, as well as global gene expression. Analyze variants using assembly projects and/or SNP data from SeqMan NGen and SeqMan Pro, or import oligonucleotide microarray and spotted array data to use ArrayStar's microarray functionality. ArrayStar offers statistical tools in conjunction with graphically rich visualizations to isolate gene or SNP sets of interest and identify their biological significance. ArrayStar can also be used in concert with the optional QSeq application to analyze RNA-Seq, ChIP-seq, CNV, and miRNA data.
Links
References
- . 2012. Journal of Biological Chemistry
- . 2012. Nucleic Acids Res.
- . 2012. PNAS
- . 2012. Investigative ophthalmology & visual science
- . 2012. Plant Physiology
- . 2012. Plant Physiology
- . 2013. Journal of Bacteriology
- . 2012. Nucleic Acids Research
- . 2013. Applied and Environmental Microbiology
- . 2013. Infection and Immunity
- . 2013. Annals of the Rheumatic Diseases
To add a reference for ArrayStar, enter the PubMed ID in the field below and click 'Add'.
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