Hairpin Annotation
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Application data |
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| Created by | Stocks MB, Mapleson D, Moxon S |
|---|---|
| Biological application domain(s) | Workflows |
| Technology | Illumina, 454 |
| Created at | University of East Anglia |
| Maintained? | Yes |
| Input format(s) | Delimited Text |
| Output format(s) | Various image file formats |
| Programming language(s) | Java |
| Licence | Custom Licence |
| Operating system(s) | Linux 64, Windows, Mac OS X |
Summary: Generates a secondary structure from an RNA sequence and highlights regions of interest using RNAplot
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Description
Part of the UEA sRNA Workbench freely available at:
http://srna-workbench.cmp.uea.ac.uk
Generates a secondary structure by folding a long RNA sequence and highlights up to 14 short RNA sequences using RNAplot, part of the Vienna Tools. Output can be in various image formats suitable for publication.
Links
References
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