IBD2

Application data
Biological application domain(s)	Exome capture
Created at	Charité-Universitätsmedizin Berlin
Maintained?	Maybe
Programming language(s)	R, Java

Summary: Our algorithm uses a non-homogeneous hidden Markov model (HMM) that employs local recombination rates to identify chromosomal regions that are identical by descent (IBD=2) in children of consanguineous or non-consanguineous parents solely based on genotype data of siblings derived from high-throughput sequencing platforms.

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Links

• IBD2 Source code [ edit link ]

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References

1. . 2011. Bioinformatics

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