KARMA
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Application data |
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| Biological application domain(s) | Sequencing, DNA methylation, Epigenetics |
|---|---|
| Principal bioinformatics method(s) | Read mapping |
| Technology | ABI SOLiD, 454, Illumina |
| Maintained? | Maybe |
| Input format(s) | FASTA, FASTQ |
| Output format(s) | SAM |
Summary: K-tuple Alignment with Rapid Matching Algorithm
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Karma is an index based high speed aligner for mapping shotgun sequencer FASTQ reads to a reference genome.
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References
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