MrCaNaVaR
Application data |
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Created by | Can Alkan |
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Biological application domain(s) | Genomics, Personalised medicine, Copy number estimation |
Principal bioinformatics method(s) | Read depth analysis |
Technology | Illumina |
Created at | University of Washington |
Maintained? | Yes |
Input format(s) | SAM |
Output format(s) | BED (copy numbers) |
Programming language(s) | C |
Licence | Commercial, Freeware |
Operating system(s) | POSIX |
Summary: mrCaNaVaR is a copy number caller that analyzes the next-generation sequence mapping read depth to discover large segmental duplications and deletions. It also has the capability of predicting absolute copy numbers of genomic intervals.
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