Mutascope

Application data
Created by	Shawn Yost, Olivier Harismendy
Biological application domain(s)	Cancer biology
Principal bioinformatics method(s)	Variant calling, Analysis pipeline
Technology	Illumina, ABI SOLiD, MiSeq
Created at	University of California San Diego
Maintained?	Yes
Input format(s)	FASTQ, SAM/BAM
Output format(s)	.bam, .vcf, other
Programming language(s)	Perl
Operating system(s)	UNIX

Summary: Mutascope is a software suite designed to analyze data from high throughput sequencing of PCR amplicons, with an emphasis on normal-tumor comparison for the accurate and sensitive identification of low prevalence mutations.

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Links

• Mutascope Source code [ edit link ]
• Mutascope Manual [ edit link ]

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References

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