Nephele
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Application data |
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| Created by | BCBB, OCICB |
|---|---|
| Biological application domain(s) | Microbial Ecology, Metagenomics, microbiome |
| Principal bioinformatics method(s) | Taxonomic profiling, Functional analysis, Metagenomic Assembly |
| Technology | Roche, Illumina |
| Created at | NIAID, NIH |
| Maintained? | Yes |
| Input format(s) | sff, (Compressed) FASTA, .fastq/.fq, 454 |
| Output format(s) | BIOM, .fasta, fastq.gz, .txt, PDF, HTML report |
| Software version | 1.0 |
| Software features | Pipelines |
| Interface type(s) | Web UI |
| Resource type(s) | Platform"Platform" is not in the list (Command-line tool, Web application, Desktop application, Script, Suite, Workbench, Database portal, Workflow, Plug-in, Library, ...) of allowed values for the "Resource type" property. |
| Contact: | nephele@niaid.nih.gov |
Summary: NIAID, a cloud based tool for microbiome or metagenomics data analysis. Nephele allows you to process and analyze 16S raw data using pipelines based on QIIME and mothur. It also facilitates WGS functional analyses using bioBakery tools such as MetaPhlAn, HUMMAnN and metagenomic assembly using the a5-miseq/UDBA-UD.
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