PeakAnalyzer
|
Application data |
|
| Created by | Zoolium |
|---|---|
| Biological application domain(s) | Functional genomics, ChIP-seq |
| Created at | EMBL-EBI |
| Maintained? | Yes |
| Output format(s) | BED, GTF |
| Programming language(s) | Java, C++, R |
Summary: PeakAnalyzer is a set of applications for processing ChIP signal peaks.
"Error: no local variable "counter" was set." is not a number.
Description
PeakAnalyzer is a set of standalone programs for the automated processing of any genomic loci, with an emphasis on datasets consisting of ChIP-derived signal peaks. The software is able to identify individual binding/modification sites from enrichment loci, retrieve peak region sequences for motif discovery, and integrate experimental data with different classes of annotated elements throughout the genome.
Links
References
none specified
To add a reference for PeakAnalyzer, enter the PubMed ID in the field below and click 'Add'.
Search for "PeakAnalyzer" in the SEQanswers forum / BioStar or:
| Web Search | Wiki Sites | Scientific |
|---|---|---|
